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Rethinking Molecular Text Representations for LLMs: An Empirical Study

Arun Raja, Garrett M. Morris, Kian Ming A. Chai
Jun 3, 2026 at 04:00
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arXiv:2606.03057v1 Announce Type: cross Abstract: Large language models (LLMs) are increasingly used for molecular tasks, but it remains unclear which molecular representation to use. We present a systematic benchmark evaluating LLM molecular competence across nine representations and eight chemical tasks. We benchmark 16 LLMs across five model...

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